Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1694 86.0 6e-15 >seq1694 Length=4589 Score = 86.0 bits (94), Expect = 6e-15 Identities = 92/118 (78%), Gaps = 9/118 (8%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGC-TCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 ||| ||||||||||||| ||| ||| |||| ||||||||||||| || |||||| ||| Sbjct 2598 GCAAACGGTGGATGCCTTGGCATCT-GGAGCCGAAGAAGGACGTAGCAATCTGCGATAAG 2656 Query 61 CTACGGGGATTGGCACATACGAA----TTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| ||| ||| | | |||||||| ||| ||||||||||| ||||| Sbjct 2657 CCTCGGGGAGTGG---ATAAGCACACTTTGATCCGAGGATCTCCGAATGGGGAAACCC 2711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476772475379