Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1694 122 2e-25 >seq1694 Length=4589 Score = 122 bits (134), Expect = 2e-25 Identities = 131/171 (77%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 257 CTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGA 316 ||||||||||| ||||||||||| | || || ||| || || || |||| |||| Sbjct 4581 CTGTGTTTTTAGTAAACAGTCGCTACCCACTAGTCTCTGCGGCCCCCAAACGCTTTCGGA 4522 Query 317 GCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAG 376 ||||||||| | || ||| | ||||||||||||||||||| | ||||||| || Sbjct 4521 GCAAGTCCTAGTACGTCGAAGGCCCCCCTTCTCCCGAAGTTACGGGGGTATTTTGCCGAG 4462 Query 377 TTCCTTCCCC-CGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||| || ||| ||||||| | | ||||||||||||||||| ||||| Sbjct 4461 TTCCTTAACCACGA-TTCTCTCGATCCCCTTGGTATTCTCTACCTGACCAC 4412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260724868928