Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq17834 105 5e-21 >seq17834 Length=1008 Score = 105 bits (116), Expect = 5e-21 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||||||| ||| ||||| || || || Sbjct 860 TACGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACTCCGTGGTCGTCGTCCCCC 919 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||| ||| | ||||| ||| | |||||||||||||||||||||||||||| Sbjct 920 TTGCGGTTAGACTAACGGCTTCTGGAGCAGCTCACTCCCATGGTGTGACGGGCGGTGTGT 979 Query 138 A 138 | Sbjct 980 A 980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345479682600