Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq6860 102 2e-19 >seq6860 Length=2744 Score = 102 bits (112), Expect = 2e-19 Identities = 125/166 (75%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 331 GGGCTACACACGTGCTACAATGGACAAT-ACAAAG---GGCAGCGAAACCGCGAGGTCAA 386 |||||||||||||||||||||| | ||| ||| | |||| | | || | | Sbjct 1 GGGCTACACACGTGCTACAATG-ATAATCACAGTGAGAGGCAATAATAATAAAAGTTGGA 59 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 ||||||| ||| || | || |||||||||| | ||| |||||| | ||||||| Sbjct 60 GCAAATCTTTAAAAATTAT-CTTAGTTCGGATTAAGGGCTGAAACTCGCCCTTATGAAGT 118 Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTT 492 |||||||||||||||||| ||| ||||||||| ||||||||| ||| Sbjct 119 TGGAATCGCTAGTAATCGCAGAACAGCATGCTGCGGTGAATATGTT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503441489600