Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq6645 80.6 4e-13 >seq6645 Length=13504 Score = 80.6 bits (88), Expect = 4e-13 Identities = 91/121 (75%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 18 AGGCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGATTTCCTGGCCGGTGTA 77 || |||||||||| | | ||| | ||||| |||||||||||| ||| || || | ||| Sbjct 12623 AGCCGACGCTTGATCGT-GCCGCGATACTGGCTGCGCGCGACGACTTCTTGCCCCGGGTA 12681 Query 78 GCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAGCATTTGCGGGATGAA 137 |||||| || |||| | |||||||| ||| | | | ||||| ||| ||||| | ||| Sbjct 12682 GCAGCCCTTGCGGAAGTTCACGCCGCCAACGACTTCCCAGTTGATCATCTGCGGTACGAA 12741 Query 138 C 138 | Sbjct 12742 C 12742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735735227450