Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq8400 114 5e-23 >seq8400 Length=2560 Score = 114 bits (126), Expect = 5e-23 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| ||| ||||||||||| | ||||||||| ||||||||| |||| ||||| || Sbjct 2507 ATTTCGCGGAAAACCAGCTATCTCTGAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 2448 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||| || | ||| | || || ||| ||||| ||||||| || ||||| |||| Sbjct 2447 ATCTCCATATTTTGCCACATATGTGAGTTCGATCCTCCAAATAGTTTTACCTATTTTTCA 2388 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 | ||| ||||| ||||||||| | |||||||||| Sbjct 2387 ATCTGTTCATGGTTAGATCACTCAGTTTCGGGTCTT 2352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816925034240