Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq34653 118 2e-24 >seq34653 Length=539 Score = 118 bits (130), Expect = 2e-24 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67 ||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| || Sbjct 122 CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTTG 180 Query 68 GGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGC 127 ||||||||||||||||||||||||| | ||| || ||| || |||| ||| | ||| Sbjct 181 GGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGGC 240 Query 128 TTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 ||||| | |||||| |||||||||| ||||| ||| | | ||||||| | || || Sbjct 241 TTGGTAGTCTATTAAACTACCAACTACCATAATCTTACGCAAACTCATCTTTTAACGTTA 300 Query 187 AA 188 || Sbjct 301 AA 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998029244160