Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq33930 185 2e-44 >seq33930 Length=550 Score = 185 bits (204), Expect = 2e-44 Identities = 200/262 (76%), Gaps = 10/262 (4%) Strand=Plus/Plus Query 137 GCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTGGCCATCATGGCGATG 196 || || | ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 16 GCACGCTTCATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTGGCCATCATGGCGCTC 75 Query 197 GTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAACAGCCCGGCTGCCATT 256 || ||||| |||||||| || || || ||||||||||| |||||||||||||| || | Sbjct 76 GTGGCCGCGTCGGTGATCGACCCGGGTGTGTACTTCGCGATGAACAGCCCGGCAGCGGTA 135 Query 257 GTCGGCACCGACG-TGGTCACCGTGGCGCAAACCGTCAGCAGTTGGGGCTTTGCCATTAC 315 |||||| ||||| || | ||||||||| |||| |||||||||| | || || Sbjct 136 ATCGGCA-CGACGCCGGAAGCAGTGGCGCAAGTCGTCTCGGGTTGGGGCTTCACGATCAC 194 Query 316 GCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGT----GAAACCACCATCCTGGCAC 371 |||||| | ||| | ||| | || | | | |||| || | ||||||| | | | Sbjct 195 GCCTGAAGTGCT----GACGTCGACCGCGAAAGCGGTTGGCGAGAACACCATCATTTCTC 250 Query 372 GTGCCGGCGGCGCGCCGACTCT 393 | || || ||||| ||||| || Sbjct 251 GCGCTGGTGGCGCACCGACGCT 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161168639840