Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq12600 93.3 8e-17 >seq12600 Length=1913 Score = 93.3 bits (102), Expect = 8e-17 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 80 GCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGAT 139 || ||||||||| ||||||| | | ||||||||| ||||| | |||| ||||| Sbjct 1578 GCATCGGGCCGCACGTACCACGTCAAGTTCAATCCGCCGAAGGTCGAAGGCGTCGACGAC 1519 Query 140 GTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGTCACCGC 199 ||||||||||| || || ||||| | ||||||| |||||||| || | ||| Sbjct 1518 GTGACCGGCGAGCCGCTCGTCCAGCGTGACGACGACAAGGAAGAAACGGTCAAGAAGCGC 1459 Query 200 CTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCTA 243 || | || || | ||||| |||||||||||||| | || ||| Sbjct 1458 CTCGCAGTGTATGAGTCGCAGACCAAGCCGCTGGTCGCCTACTA 1415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898866082080