Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001702.1 Length=226 Score E Sequences producing significant alignments: (Bits) Value seq11481 78.8 1e-12 >seq11481 Length=2961 Score = 78.8 bits (86), Expect = 1e-12 Identities = 138/201 (69%), Gaps = 9/201 (4%) Strand=Plus/Plus Query 1 CGACGATGAAACGGAAAATCCCGTAGAACAACGCGAACATGCCCGACACGGCCATGGTTG 60 || ||| ||| ||||| | ||||||| || |||||| |||||||| ||| | Sbjct 792 CGGCGAGGAAGCGGAACAGCCCGTAGCCCACGAGGAACATACCCGACACCGCCCCTACCG 851 Query 61 GGCGTGGCTTGCGCGAGAAGATGTAGAGGATAAGGAACAGCGCCACACCTTCCAACGCAA 120 | || | |||| ||||| | || | |||||||||||||| ||||||| ||||| Sbjct 852 GACGCGCACGCCGCGCGAAGAACCACAGCAGCAGGAACAGCGCCACGCCTTCCAGCGCAA 911 Query 121 ACTGGTAGAGCTGCGACGGATGGCGCGGCAGTTGTGCCGGGTCGCTGAACGGGGGGAACA 180 | | | | | ||||||||| | |||||||| |||| | |||| | | ||||| Sbjct 912 ATTCGAACAACTGCGACGGGTAACGCGGCAG----GCCGTG-----GAACTGCGCGAACA 962 Query 181 CCATCGCCCACGGCACATCGG 201 || ||||| || | ||||| Sbjct 963 CCGTCGCCAGCGCCTGATCGG 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623775518925