Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq15412 118 2e-24 >seq15412 Length=1236 Score = 118 bits (130), Expect = 2e-24 Identities = 142/189 (75%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 ||||||| || |||||| | || |||||| | ||||| || ||| ||||| |||| Sbjct 954 GCTTCGGTAAATTTCTTAAGTCTCGATACATTTTAGGCGCAAAAAAACTAGACCAATGAG 1013 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||| ||||| ||||||||||||||||||||| |||| |||||||| Sbjct 1014 CTATTACGCTTTCTTTAAAGGATGGCTGCTTCCAAGCCTACCTACTGGTTGTAATTATTT 1073 Query 332 CTCCACATCCTTTCCCACTGAG-TCACCACTTAGGGGCCTTAGCTGAT-GATCTGGGCTG 389 | ||| |||||| |||| || | | || | | ||||||| ||| |||||||||| Sbjct 1074 TTTCACTTCCTTTTTCACTTAGAATATTATTTTGAGACCTTAGC-GATCAATCTGGGCTG 1132 Query 390 TTTCCCTCT 398 ||||||||| Sbjct 1133 TTTCCCTCT 1141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177162698240