Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq19625 73.4 6e-11 >seq19625 Length=919 Score = 73.4 bits (80), Expect = 6e-11 Identities = 87/117 (74%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 ||||| ||| |||||||| |||||| | ||||||||||| || ||||||||| | | Sbjct 785 GATAGAAACCATACTGTCTCACGACGTATTAAACCCAGCTCGTGTAGCTCTTTAATCGAC 844 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCA-GCCCCAGGATGAGACGAGCCGACATCG 275 |||||| | ||||||| | || || || |||||||| ||||||||||| Sbjct 845 GAACAGTCGAACCCTTCATGATTTCTACATGCATGAGGATGAGCTAAGCCGACATCG 901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780519110860