Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq35890 147 4e-33 >seq35890 Length=517 Score = 147 bits (162), Expect = 4e-33 Identities = 149/192 (78%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 12 GCCGCTGGATTTCGCGGTGTTCCCGA-CGTATTCTGCAGGTGGCGACCCTGCTACGTCTG 70 |||||| || ||||||| |||||||| ||| || || | | | || |||| |||||| Sbjct 325 GCCGCTCGACTTCGCGGCGTTCCCGAGCGTGTT--GCTGTTCTCCACGTTGCTGCGTCTG 382 Query 71 GCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCT 130 | ||||||| || |||||||| |||||| ||||| | ||||| ||||| | |||| Sbjct 383 TCGCTGAACGTGGCGTCCACGCGCGTGGTGCTGCTCGAAGGCCACACCGGCCCGGACGCT 442 Query 131 GCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGT 190 ||||||||||||||| |||| ||||| | | || | ||||| ||||||| |||||| Sbjct 443 GCCGGTAAGGTGATCGAGGCGTTCGGCCACTTCCTGGTGGGCGGCAACTACGCCGTCGGT 502 Query 191 ATCGTGGTGTTC 202 |||||||||||| Sbjct 503 ATCGTGGTGTTC 514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809308750195