Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq11126 100 6e-19 >seq11126 Length=3477 Score = 100 bits (110), Expect = 6e-19 Identities = 107/141 (76%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 245 TCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCT 304 |||| ||||| |||||||| || || || || ||||| ||||||||||||||||| || Sbjct 1569 TCCAGTACCCAAGTGTCCTTCGTCCCTCCACCCTGCGAGGAGTTGACGACCAGCGAACCC 1628 Query 305 TCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAG--- 361 || | ||||| ||||| |||| |||||| ||||||| | ||||||||||| Sbjct 1629 TCTGTGAGCGCGACGCGCGTCAGGCCACCCGGCACCATGGTCACGCCCTTGCCCGAGGAC 1688 Query 362 AGCACGAAGGGTCGCAAGTCG 382 | ||||| || |||| |||| Sbjct 1689 AATACGAACGGCCGCAGGTCG 1709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119584088000