Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1845 125 1e-26 >seq1845 Length=12013 Score = 125 bits (138), Expect = 1e-26 Identities = 139/182 (76%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGT--TCTATTTTGTTGGTTTCTAGG 176 ||| ||||| ||||||||||| ||| | | | ||| |||||||||||||||| | Sbjct 8357 ATATATTAGTATGGAATAATAAGATACGGCTTT-GGTAGTCTATTTTGTTGGTTTGCAC- 8414 Query 177 ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAA 236 || || |||||||||||||| ||| |||||||| |||| | |||||||||||| Sbjct 8415 ACTAGGGTTATGATTAATAGGGACAGTTGGGGGTGTATATATTTCAACGTCAGAGGTGAA 8474 Query 237 ATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTA 296 ||||||||||| | |||| | || |||||||| || ||||||||| | ||||||| Sbjct 8475 ATTCTTGGATTGCTGAAAGATGAGCTTAGGCGAAAGCATTTACCAAGGATATGTTCATTA 8534 Query 297 AT 298 || Sbjct 8535 AT 8536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915113660032