Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq8094 122 2e-25 >seq8094 Length=3401 Score = 122 bits (134), Expect = 2e-25 Identities = 142/188 (76%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 24 TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCT 83 |||| ||| ||| ||| |||||||| |||||||| |||||||||| ||||||||||||| Sbjct 2913 TCACTCACTCGGTATTA-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCT 2855 Query 84 GCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGAC 143 |||| | ||| ||| |||||||||||| ||| |||| |||||||| || ||| || Sbjct 2854 GCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAAC 2796 Query 144 CAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC-TAATCCGACCTAG 202 ||| || ||| | | |||||| | |||| |||||||| | ||||| || | Sbjct 2795 CAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACCAACTACCATAATCTTACGCAA 2736 Query 203 GCTCATCT 210 ||||||| Sbjct 2735 ACTCATCT 2728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071898867520