Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq8094 118 2e-24 >seq8094 Length=3401 Score = 118 bits (130), Expect = 2e-24 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67 ||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| || Sbjct 2896 CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTTG 2838 Query 68 GGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGC 127 ||||||||||||||||||||||||| | ||| || ||| || |||| ||| | ||| Sbjct 2837 GGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGGC 2778 Query 128 TTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 ||||| | |||||| |||||||||| ||||| ||| | | ||||||| | || || Sbjct 2777 TTGGTAGTCTATTAAACTACCAACTACCATAATCTTACGCAAACTCATCTTTTAACGTTA 2718 Query 187 AA 188 || Sbjct 2717 AA 2716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998305810944