Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq8094 116 9e-24 >seq8094 Length=3401 Score = 116 bits (128), Expect = 9e-24 Identities = 134/178 (75%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||| ||| ||| ||| || ||| |||| |||| ||| |||||| ||| ||||||| Sbjct 2920 GCCTTCATCACTCACTCGGTATTACTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCC 2861 Query 79 ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTC 138 |||||||||| | ||| ||| |||||||||||| ||| |||||||| |||| || Sbjct 2860 ACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTT 2802 Query 139 TCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC-TAATC 195 ||| |||||||| ||| | | || ||| | | |||| | ||||||| | ||||| Sbjct 2801 TCAAACCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACCAACTACCATAATC 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222284678784