Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq8094 73.4 8e-11 >seq8094 Length=3401 Score = 73.4 bits (80), Expect = 8e-11 Identities = 133/192 (69%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 |||||||| |||| | | |||| ||| || ||| ||||| |||| ||||| || Sbjct 2919 CCTTCATCACTCACTCGGTATTACTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCA 2860 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 ||||||||| | ||||||| |||||||||||| ||||||||| || | | || | Sbjct 2859 CTGCTGCCTTTAAAAA-AGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTT 2801 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACC-TAATGGAA 283 || | | ||| || |||||| ||| | | ||| | || |||||| |||| | Sbjct 2800 CAAACCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACCAACTACCATAATCTTA 2741 Query 284 CGCATCCCCATC 295 |||| | |||| Sbjct 2740 CGCAAACTCATC 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068699169408