Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9395 84.2 9e-11 seq1089 84.2 9e-11 >seq9395 Length=1316 Score = 84.2 bits (92), Expect = 9e-11 Identities = 81/101 (80%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 222578 GGTG-CGGCACGCCGTACTGGACGGCACCCGAGATCATCACC--CAAGAGCGCTACACCG 222634 |||| |||||| ||||||||||| |||||| | ||| ||||| ||||||| Sbjct 724 GGTGTCGGCACCATCTACTGGACGGCCCCCGAGGTACTCATGGGCAAGAAG--TACACCG 667 Query 222635 AGAAGGCCGACGTCTACTCGTTCGGCATCATCATGTGGGAG 222675 ||||||||||| ||||||||||||||||| |||||| |||| Sbjct 666 AGAAGGCCGACATCTACTCGTTCGGCATCGTCATGTCGGAG 626 >seq1089 Length=17743 Score = 84.2 bits (92), Expect = 9e-11 Identities = 81/101 (80%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 222578 GGTG-CGGCACGCCGTACTGGACGGCACCCGAGATCATCACC--CAAGAGCGCTACACCG 222634 |||| |||||| ||||||||||| |||||| | ||| ||||| ||||||| Sbjct 15252 GGTGTCGGCACCATCTACTGGACGGCCCCCGAGGTGCTCATGGGCAAGAAG--TACACCG 15195 Query 222635 AGAAGGCCGACGTCTACTCGTTCGGCATCATCATGTGGGAG 222675 ||||||||||| ||||||||||||||||| |||||| |||| Sbjct 15194 AGAAGGCCGACATCTACTCGTTCGGCATCGTCATGTCGGAG 15154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084481064986332