Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq23 262 6e-68 seq8 262 6e-68 >seq23 Length=187360 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 163182 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 163125 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||||| | |||||||| |||||||| | ||||||| |||| |||||| Sbjct 163124 CTCGTTCAAGACTGAAAATTGCAACAGTCTATCCCTAGCACGATGCGCATTCACAAGATT 163065 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 163064 ACCCAGACCTATCGATCAAGGTTGTATACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 163005 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 163004 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 162956 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 184801 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 184744 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||||| | |||||||| |||||||| | ||||||| |||| |||||| Sbjct 184743 CTCGTTCAAGACTGAAAATTGCAACAGTCTATCCCTAGCACGATGCGCATTCACAAGATT 184684 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 184683 ACCCAGACCTATCGATCAAGGTTGTATACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 184624 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 184623 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 184575 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 185492 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 185435 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||||| | |||||||| |||||||| | ||||||| |||| |||||| Sbjct 185434 CTCGTTCAAGACTGAAAATTGCAACAGTCTATCCCTAGCACGATGCGCATTCACAAGATT 185375 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 185374 ACCCAGACCTATCGATCAAGGTTGTATACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 185315 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 185314 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 185266 >seq8 Length=3549547 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 3548351 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 3548294 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||||| | |||||||| |||||||| | ||||||| |||| |||||| Sbjct 3548293 CTCGTTCAAGACTGAAAATTGCAACAGTCTATCCCTAGCACGATGCGCATTCACAAGATT 3548234 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 3548233 ACCCAGACCTATCGATCAAGGTTGTATACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 3548174 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3548173 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 3548125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999402630