Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq23 109 3e-22 seq8 109 3e-22 >seq23 Length=187360 Score = 109 bits (120), Expect = 3e-22 Identities = 96/119 (81%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA--AATGATAACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| || | ||| | Sbjct 162646 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTTAAAGTAAACGACTG 162587 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 162586 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 162528 Score = 109 bits (120), Expect = 3e-22 Identities = 96/119 (81%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA--AATGATAACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| || | ||| | Sbjct 184265 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTTAAAGTAAACGACTG 184206 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 184205 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 184147 >seq8 Length=3549547 Score = 109 bits (120), Expect = 3e-22 Identities = 96/119 (81%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA--AATGATAACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| || | ||| | Sbjct 3547815 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTTAAAGTAAACGACTG 3547756 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 3547755 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 3547697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399785980