Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq23 313 4e-83 seq8 313 4e-83 >seq23 Length=187360 Score = 313 bits (346), Expect = 4e-83 Identities = 220/250 (88%), Gaps = 7/250 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 163023 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 162964 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCC-----AGCCACCAACC 128 ||||||| |||| | || | |||| ||||||||||||||| | | | ||||| Sbjct 162963 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACAAACCTACCAAAA 162904 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || ||| |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 162903 ATGGTAAGCGGGACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 162844 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162843 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 162784 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 162783 TCAATCTGTC 162774 Score = 313 bits (346), Expect = 4e-83 Identities = 220/250 (88%), Gaps = 7/250 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 184642 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 184583 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCC-----AGCCACCAACC 128 ||||||| |||| | || | |||| ||||||||||||||| | | | ||||| Sbjct 184582 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACAAACCTACCAAAA 184523 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || ||| |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 184522 ATGGTAAGCGGGACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 184463 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 184462 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 184403 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 184402 TCAATCTGTC 184393 Score = 150 bits (166), Expect = 3e-34 Identities = 127/155 (82%), Gaps = 7/155 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 185333 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 185274 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCC-----AGCCACCAACC 128 ||||||| |||| | || | |||| ||||||||||||||| | | | ||||| Sbjct 185273 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACAAACCTACCAAAA 185214 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTC 163 || || ||| |||||||||| | ||||||| Sbjct 185213 ATGGTAAGCGGGACTATTTAGCACGCGGAGGTCTC 185179 >seq8 Length=3549547 Score = 313 bits (346), Expect = 4e-83 Identities = 220/250 (88%), Gaps = 7/250 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3548192 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 3548133 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCC-----AGCCACCAACC 128 ||||||| |||| | || | |||| ||||||||||||||| | | | ||||| Sbjct 3548132 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACAAACCTACCAAAA 3548073 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || ||| |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 3548072 ATGGTAAGCGGGACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 3548013 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3548012 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 3547953 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 3547952 TCAATCTGTC 3547943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799367042