Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq23 381 1e-103 >seq23 Length=187360 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 117824 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 117765 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 117764 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 117705 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 117704 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 117645 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 117644 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCTAAAGAACTAAAGGATCGATAGG 117585 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 117584 CCACGCTTTCACGGTTTGTATTCA 117561 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 148746 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 148687 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 148686 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 148627 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 148626 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 148567 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 148566 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCTAAAGAACTAAAGGATCGATAGG 148507 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 148506 CCACGCTTTCACGGTTTGTATTCA 148483 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 167204 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 167263 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 167264 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 167323 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 167324 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 167383 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 167384 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCTAAAGAACTAAAGGATCGATAGG 167443 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 167444 CCACGCTTTCACGGTTTGTATTCA 167467 Score = 369 bits (408), Expect = 6e-100 Identities = 236/257 (92%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 120420 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 120361 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 120360 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 120301 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 120300 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 120241 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 120240 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCTAAAGAACTAAAGGATCGATAGG 120181 Query 271 CCACACTTTCATGGTTT 287 |||| |||||| ||||| Sbjct 120180 CCACGCTTTCACGGTTT 120164 Score = 132 bits (146), Expect = 8e-29 Identities = 91/103 (88%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 192 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 || || |||||||||||||||||||||||||||||| |||||||||| | ||||| | Sbjct 120136 TGTCAGAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCTAAA 120077 Query 252 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||||||||||||||||||||| |||||| |||||||||||| Sbjct 120076 GAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 120034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399299392