Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq23 255 1e-65 seq8 255 1e-65 >seq23 Length=187360 Score = 255 bits (282), Expect = 1e-65 Identities = 213/260 (82%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 162922 CTTCTTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 162981 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 162982 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATAC 163041 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || |||||||||||||||||| || ||||||| |||||||| | Sbjct 163042 AACCTTGATCGATAGGTCTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGACTGT 163101 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| ||| ||||||||| || |||| Sbjct 163102 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGA 163161 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 163162 TTACGTCCCTGCCCTTTGTA 163181 Score = 255 bits (282), Expect = 1e-65 Identities = 213/260 (82%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 184541 CTTCTTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 184600 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 184601 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATAC 184660 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || |||||||||||||||||| || ||||||| |||||||| | Sbjct 184661 AACCTTGATCGATAGGTCTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGACTGT 184720 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| ||| ||||||||| || |||| Sbjct 184721 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGA 184780 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 184781 TTACGTCCCTGCCCTTTGTA 184800 Score = 255 bits (282), Expect = 1e-65 Identities = 213/260 (82%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 185232 CTTCTTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 185291 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 185292 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATAC 185351 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || |||||||||||||||||| || ||||||| |||||||| | Sbjct 185352 AACCTTGATCGATAGGTCTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGACTGT 185411 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| ||| ||||||||| || |||| Sbjct 185412 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGA 185471 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 185472 TTACGTCCCTGCCCTTTGTA 185491 >seq8 Length=3549547 Score = 255 bits (282), Expect = 1e-65 Identities = 213/260 (82%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 3548091 CTTCTTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 3548150 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 3548151 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATAC 3548210 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || |||||||||||||||||| || ||||||| |||||||| | Sbjct 3548211 AACCTTGATCGATAGGTCTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGACTGT 3548270 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| ||| ||||||||| || |||| Sbjct 3548271 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGA 3548330 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 3548331 TTACGTCCCTGCCCTTTGTA 3548350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199223296