Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq953 104 6e-20 >seq953 Length=31761 Score = 104 bits (114), Expect = 6e-20 Identities = 231/344 (67%), Gaps = 16/344 (5%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||| | || || ||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 19153 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 19211 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGT 120 || ||| ||| ||||||| | | ||||||||| || | ||| ||| | |||| Sbjct 19212 GCGAGCATTATTCGGAATGATTAGGCGTAAAGAGTTTGTAGGTTGTTTTTTAAG------ 19265 Query 121 GTGAAATCCCCGG------GCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGT 174 ||||| | | ||| ||| | || | || |||| ||| |||| Sbjct 19266 TTGAAAAAAACAGATTAAAGCTCAACTTTATAAATTTTTTCAAAACTGATAAACTGGAGT 19325 Query 175 GT-GTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAA 233 | ||||| ||||||| | || || | |||| ||| |||| | ||||| Sbjct 19326 ATAAATAGAGGATAATGGAATTTCTATTGGAGTGATAAAATACGTTGATAATAGAAGGAA 19385 Query 234 CACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGG 293 ||| | |||||||||| ||||| | |||||| || | |||||||| |||| Sbjct 19386 GACCTAAGGCGAAGGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCTTGGGT 19445 Query 294 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||| ||| |||||||| |||| ||||||||| || |||||||| Sbjct 19446 AGCGAACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGAT 19489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289446524704