Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq953 232 2e-58 >seq953 Length=31761 Score = 232 bits (256), Expect = 2e-58 Identities = 350/499 (70%), Gaps = 34/499 (7%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 19559 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 19618 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | || | | Sbjct 19619 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAATTAAATTAAAAA 19671 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 | ||| | ||||| | ||||||| ||||||||||||||| Sbjct 19672 ATTAAATTT-------------AATTTAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 19718 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | || | ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 19719 TTGTAAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTATTAGTTGCTAATTT 19778 Query 245 ATT-------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 ||| || | ||||||| | | ||||| | |||||||| || Sbjct 19779 ATTTAAAATAAATAAAAGTACTCTAATAAAAAGATCAATGACAGGTTGAAGGAAGGTAGG 19838 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||| || ||||| ||||||||| ||||||||||||||||||||||||| | Sbjct 19839 GATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGGTAAT 19898 Query 358 TACAAAGGGCAGCGA----AACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 ||||| | | || | || | | ||||||| | ||||| | ||| |||| Sbjct 19899 TACAATGAGAGGCAATAATAATTTAAAATTGGAGCAAAT-CTTTAAAGATTATCTTAGTT 19957 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC 473 |||||| | ||| |||||| | ||||||| ||||||||||||||||| ||| |||| Sbjct 19958 CGGATTAAGGGCTGAAACTCGCCCTTATGAAGTAGGAATCGCTAGTAATCGCAGAACAGC 20017 Query 474 ATGCTACGGTGAATACGTT 492 ||||| ||||||||| ||| Sbjct 20018 ATGCTGCGGTGAATATGTT 20036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503821008960