Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10474 304 2e-80 >seq10474 Length=1557 Score = 304 bits (336), Expect = 2e-80 Identities = 220/250 (88%), Gaps = 7/250 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1493 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 1434 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCAGCCACCAACCATAG 132 ||||||| |||| | || | |||| ||||||||||||||| ||| |||| || | | Sbjct 1433 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACACACCTACAAAAA 1374 Query 133 --TCGATGGGG--CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | | || ||| |||||| | ||||||||||||||| |||||||||||||||| Sbjct 1373 ATTGTAAGCGGAACTAGTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 1314 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1313 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 1254 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 1253 TCAATCTGTC 1244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796708136181