Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq953 111 3e-22 >seq953 Length=31761 Score = 111 bits (122), Expect = 3e-22 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 || |||||||||||||||||| ||||| ||||||||||||||| | ||||| || ||| Sbjct 6565 GGTAGTTTGACTGGGGCGGTCACCTCCTAAAGAGTAACGGAGGTGTACAAAGGTAAGCTC 6506 Query 187 AGCTTGGATGGAA--ACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244 | |||||| | | || | | || || || ||||| || ||||||| | | Sbjct 6505 AAATTGGATTATATTATCAATTGTAGAGCATAATGGTAAAAGCTTGCTTGACTGTAAGAT 6446 Query 245 CCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304 || || | |||||||||||||||| | || ||||||| | || ||||| | Sbjct 6445 AGACATATCAAACAGGGACGAAAGTCGGTCATAGTGATCCGATAATTCTTTGTGGAAAGA 6386 Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| ||||||||||| ||| | ||||||| Sbjct 6385 TTATCGCTCAACGGATAAAAGGTACTCCGGGGATA 6351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982283084576