Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq953 141 2e-31 >seq953 Length=31761 Score = 141 bits (156), Expect = 2e-31 Identities = 144/180 (80%), Gaps = 7/180 (4%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| || |||| |||||||| |||||||| |||||||||| |||||| Sbjct 19108 CCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCC 19051 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||||||||||| | ||| |||||||||||||||||||| |||| |||||||| || Sbjct 19050 CACTGCTGCCTTTAAAAA-AGTTTGGACCGTGTCTCAGTTCCAATGTGGCTGATCATTCT 18992 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT--ACCTCACCAACTAGCTAATC 194 ||| ||||| || ||| |||| |||||| || | || | || |||||| | |||||| Sbjct 18991 TTCAAACCAGCTAAAGATAGTCGGCTTGGT-AGTCTTTTAAACT-ACCAACAACCTAATC 18934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071872421280