Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq1990 84.2 4e-14 >seq1990 Length=9444 Score = 84.2 bits (92), Expect = 4e-14 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 51 AGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACA 110 |||| || ||||||| ||||| || ||| |||||| |||||| | | || Sbjct 418 AGCGCATCTCTGGCCGCCGCGTGCACCCGGCCAGCGGCCGCAGCTACCACGTCAAGTTCA 477 Query 111 ATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGG 170 | ||||| ||||| || ||||||||||||||||| ||||| ||| | |||||||||| Sbjct 478 ACCCGCCCAAGGTGGCCGGCAAGGACGATGTGACGGGCGAGCCGCTGATCCAGCGCAAGG 537 Query 171 ACGACACCG 179 |||||| || Sbjct 538 ACGACAACG 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899092986208