Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq953 84.2 5e-14 >seq953 Length=31761 Score = 84.2 bits (92), Expect = 5e-14 Identities = 111/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| ||| || ||| ||||| |||| ||||| ||||||||||| | ||||| Sbjct 19086 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 19028 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 ||||||||||||||||||||||||| || | | || ||| | | ||| || || || Sbjct 19027 GGACCGTGTCTCAGTTCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGTCGG 18968 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 || ||| | | ||| | || || ||||||| Sbjct 18967 CTTGGTAGTCTTTTAAACTACCAACAACCTAAT 18935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068672802112