Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2498 262 6e-68 >seq2498 Length=10311 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 8846 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 8789 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||||| | |||||||| |||||||| | ||||||| |||| |||||| Sbjct 8788 CTCGTTCAAGACTGAAAATTGCAACAGTCTATCCCTAGCACGATGCGCATTCACAAGATT 8729 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 8728 ACCCAGACCTATCGATCAAGGTTGTATACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 8669 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 8668 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 8620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751968572510