Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq267 113 6e-23 >seq267 Length=38185 Score = 113 bits (124), Expect = 6e-23 Identities = 171/242 (71%), Gaps = 11/242 (5%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| || |||||||| ||||| | || ||| | ||| Sbjct 7580 CTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCAT-TTAGCAGAGTCCT 7638 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 ||||||| ||||||||||| ||| ||||| | || ||| | | | || | | Sbjct 7639 AAGTTTTTATTAAACAGTCGCAACCCCCTATTTTGTGACACCGA-ATTATTTTAAAAAAT 7697 Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186 ||| || || || |||||||||||| | ||||||||||| |||||| Sbjct 7698 AATTC---------GGTACTTTTTATCCCGAAGTTACAAAGTCATTTTGCCGAGTTCCTT 7748 Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 | | ||||| | | | ||||||| | ||| |||| ||||||||||||||||| || Sbjct 7749 CAATATAGTTCTCTCATTCACCTTAGTCTACTCGACCTATCCACCTGTGTCGGTTTAGGG 7808 Query 247 TA 248 || Sbjct 7809 TA 7810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694370979722