Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq267 122 2e-25 >seq267 Length=38185 Score = 122 bits (134), Expect = 2e-25 Identities = 133/173 (77%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 23 TTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGC 82 ||||| ||| ||| |||| |||||||| |||| ||| |||||||||| |||||||||||| Sbjct 28856 TTCACTCACTCGGTATTG-CTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCCCACTGC 28914 Query 83 TGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 142 ||||| | ||| ||| |||||||||||| ||| |||| |||||||| || ||| | Sbjct 28915 TGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAA 28973 Query 143 CCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC-TAATC 194 |||| || ||| | | |||||| | |||| |||||||| | ||||| Sbjct 28974 CCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACCAACTACCGTAATC 29026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071953753920