Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq267 127 5e-27 >seq267 Length=38185 Score = 127 bits (140), Expect = 5e-27 Identities = 144/189 (76%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 ||||||| || |||||| | || |||||| | ||||| || ||| ||||| |||| Sbjct 8120 GCTTCGGTAAATTTCTTAAGTCTCGATACATTTTAGGCGCAAAAAAACTAGACCAATGAG 8179 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||| ||||| ||||||||||||||||||||| |||| |||||||| | Sbjct 8180 CTATTACGCTTTCTTTAAAGGATGGCTGCTTCCAAGCCTACCTACTGGTTGTAATCATTT 8239 Query 332 CTCCACATCCTTTCCCACTGAG-TCACCACTTAGGGGCCTTAGCTGAT-GATCTGGGCTG 389 | ||| |||||| |||| || | | |||| | ||||||| ||| |||||||||| Sbjct 8240 TTTCACTTCCTTTTTCACTTAGAATATTATTTAGAGACCTTAGC-GATCAATCTGGGCTG 8298 Query 390 TTTCCCTCT 398 ||||||||| Sbjct 8299 TTTCCCTCT 8307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177549198336