Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq267 168 2e-39 >seq267 Length=38185 Score = 168 bits (186), Expect = 2e-39 Identities = 333/491 (68%), Gaps = 35/491 (7%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 7157 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 7215 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| || | || |||| ||| | | | |||||||| Sbjct 7216 TACACTGTCT---------ATTTTTAA--AATATTAGTTATTTATTTTAATAAGAGTGGT 7264 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| | || | | |||||||| | | | | |||| ||| || Sbjct 7265 ATTTCAAAGATATCTAAATGATTTACTAGCGTAAAGATCTAAATGATTACCACTTATGCT 7324 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| ||| Sbjct 7325 ACACATATTATATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 7384 Query 314 CCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGA 372 | | | ||| | ||||||| || || | ||| ||||| | | || | | || Sbjct 7385 CTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGA 7443 Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 |||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 7444 GACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTC 7503 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTC 492 |||||||||||| || | |||||| ||||||||||||||| |||| ||| Sbjct 7504 GCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATT--------- 7554 Query 493 ACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGT 552 | || | || |||| |||| |||||||||||||||||| ||||| Sbjct 7555 ----------TAATGCGTAAACATTTCCTTTTAATCTTCCAGCACCGGGCAGGTGTCAGA 7604 Query 553 CCGTATACCTC 563 || ||||| || Sbjct 7605 CCCTATACATC 7615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702326558464