Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq241 233 4e-59 >seq241 Length=38274 Score = 233 bits (258), Expect = 4e-59 Identities = 271/369 (73%), Gaps = 20/369 (5%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| ||||| |||||||| | ||||||| | | ||||| Sbjct 22223 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 22164 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 22163 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 22104 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||||||||| ||| || | ||| | |||| ||| Sbjct 22103 GAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGCGT---------AAACATTTCC 22053 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||||||||||||||| ||||| |||||||||| | || | | ||||||| Sbjct 22052 TTTTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 21993 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----------T 295 | ||| |||||| ||||||||||| |||||| | || || | Sbjct 21992 AGTCCTAAGTTTTTATTAAACAGTCGCAACCCCCTATTTTGTGACACCGAATTATTTTTT 21933 Query 296 GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACA 355 ||| || || || |||| ||||||| |||||||||||||||||||| | Sbjct 21932 AAAATAATTCGGTACTTTTTATCCCGAAGTTACAAAGTCATTTTGCCGAGTTCCTTCAAT 21873 Query 356 ATAGTTCTC 364 ||||||||| Sbjct 21872 ATAGTTCTC 21864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062335979776