Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq241 122 2e-25 >seq241 Length=38274 Score = 122 bits (134), Expect = 2e-25 Identities = 133/173 (77%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 23 TTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGC 82 ||||| ||| ||| |||| |||||||| |||| ||| |||||||||| |||||||||||| Sbjct 683 TTCACTCACTCGGTATTG-CTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCCCACTGC 625 Query 83 TGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 142 ||||| | ||| ||| |||||||||||| ||| |||| |||||||| || ||| | Sbjct 624 TGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAA 566 Query 143 CCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC-TAATC 194 |||| || ||| | | |||||| | |||| |||||||| | ||||| Sbjct 565 CCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACCAACTACCTTAATC 513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071935401280