Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq241 123 9e-26 >seq241 Length=38274 Score = 123 bits (136), Expect = 9e-26 Identities = 181/255 (71%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTAC 115 ||||||||||| || ||| ||||| || | |||||||| || |||||||||| Sbjct 21264 ATTCGGAGTTTCCAAGAATTCAGTAAGTTTTTATACCCCCTAGCTCAATGAGTGCTCTAC 21205 Query 116 CTCCGGGAAGAAACACGCG---ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTAT 172 | | || ||| | | ||| || | ||| |||||| ||| |||||||||| Sbjct 21204 CCCA---AAAAAAGATTTTTAAATGCTCTACTTCAATAGATTTCGCGGAAAACCAGCTAT 21148 Query 173 CACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTA 232 | | ||||||||| ||||||||| |||| ||||| ||||| || | ||| | || || Sbjct 21147 CTCTGAGTTTGATTAGCCTTTCACTCCTAACCACAAATCATCTCCATATTTTGCCACATA 21088 Query 233 AGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCAC 292 ||| ||||| ||||||| || ||||| ||||| ||| ||||| |||||||| Sbjct 21087 TGTGAGTTCGATCCTCCAAATAGTTTTACCTATTTTTCAATCTGTTCATGGTTAGATCAC 21028 Query 293 TTCGCTTCGGGTCTT 307 | | |||||||||| Sbjct 21027 TCAGTTTCGGGTCTT 21013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817490471424