Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq241 111 3e-22 >seq241 Length=38274 Score = 111 bits (122), Expect = 3e-22 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | || | | |||||| ||| || |||||||||||||| | ||| | Sbjct 666 GCTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 608 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| || |||| ||| | || Sbjct 607 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 548 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | |||||| |||||||||| ||||| ||| | | | ||||| | || | Sbjct 547 CTTGGTAGTCTATTAAACTACCAACTACCTTAATCTTGCGCAAACTCGTCTTTTAACGTT 488 Query 186 AAA 188 ||| Sbjct 487 AAA 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998339836416