Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq241 168 2e-39 >seq241 Length=38274 Score = 168 bits (186), Expect = 2e-39 Identities = 333/491 (68%), Gaps = 35/491 (7%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 22468 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 22410 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| || | || |||| ||| | | | |||||||| Sbjct 22409 TACACTGTCT---------ATTTTTAA--AATATTAGTTATTTATTTTAATAAGAGTGGT 22361 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| | || | | |||||||| | | | | |||| ||| || Sbjct 22360 ATTTCAAAGATATCTAAATGATTTACTAGCGTAAAGATCTAAATGATTACCACTTATGCT 22301 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| ||| Sbjct 22300 ACACATATTATATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 22241 Query 314 CCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGA 372 | | | ||| | ||||||| || || | ||| ||||| | | || | | || Sbjct 22240 CTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGA 22182 Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 |||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 22181 GACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTC 22122 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTC 492 |||||||||||| || | |||||| ||||||||||||||| |||| ||| Sbjct 22121 GCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATT--------- 22071 Query 493 ACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGT 552 | || | || |||| |||| |||||||||||||||||| ||||| Sbjct 22070 ----------TAATGCGTAAACATTTCCTTTTAATCTTCCAGCACCGGGCAGGTGTCAGA 22021 Query 553 CCGTATACCTC 563 || ||||| || Sbjct 22020 CCCTATACATC 22010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702297413376