Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20x_20alni_20[genbank_20GCA_5F000439335.1_202013-07-23] 118,474 sequences; 235,999,877 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq76730 98.7 2e-18 seq64516 95.1 2e-17 >seq76730 Length=801 Score = 98.7 bits (108), Expect = 2e-18 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 39 TGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98 ||||| | |||| || |||||||| ||||||||||||| ||||||||||||||||| Sbjct 801 TGCGGTTAGCTGAAAAGCTAGTGCCGCCAAGCTACCATCTGTAGGATTATGGCTGAACGC 742 Query 99 CTCTAAGTCAGAATCCATG 117 ||||||||||||||||||| Sbjct 741 CTCTAAGTCAGAATCCATG 723 >seq64516 Length=1583 Score = 95.1 bits (104), Expect = 2e-17 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 39 TGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98 ||||| | |||| || |||||||| | ||||||||||| ||||||||||||||||| Sbjct 122 TGCGGTTAGCTGAAAAGCTAGTGCCGCCAGGCTACCATCTGTGGGATTATGGCTGAACGC 63 Query 99 CTCTAAGTCAGAATCCATGC 118 |||||||||||||||||||| Sbjct 62 CTCTAAGTCAGAATCCATGC 43 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818259790336