Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2369 89.7 6e-16 seq2138 75.2 1e-11 >seq2369 Length=603 Score = 89.7 bits (98), Expect = 6e-16 Identities = 81/101 (80%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC----G 65 ||||||||||||||| || | ||| ||| ||||||||||||||||||||||| | Sbjct 306 AAACCAACAAAATAG--ACCAAAGTCATATCTTATTATTCCATGCTAATGTATTCAAATG 249 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || | ||||||||| |||||||||||||| ||| |||| Sbjct 248 AGCTAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAA 208 >seq2138 Length=593 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 294 CCAACGTAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 236 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || |||||||| ||||||||||| |||| |||| Sbjct 235 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595181767908