Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2253 104 2e-20 seq3144 98.7 8e-19 >seq2253 Length=601 Score = 104 bits (114), Expect = 2e-20 Identities = 77/90 (86%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 72 CTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGA 131 || |||||| |||||||| ||||||| |||||| | |||||||||||| ||||||| Sbjct 9 CTTTGTATGCGCCATTGTAGCACGTGTGTAGCCCTGGTCGTAAGGGCCATGATGACTTGA 68 Query 132 CGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||| |||| |||| Sbjct 69 CGTCATCCCCACCTTCCTCCAGTTTATCAC 98 >seq3144 Length=3372 Score = 98.7 bits (108), Expect = 8e-19 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| |||||||||| ||||||| ||||| || |||||||||||||| |||||||||| Sbjct 1408 TGTAATTACCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGT 1467 Query 135 CATCCCCACCTTCC 148 |||||||||||||| Sbjct 1468 CATCCCCACCTTCC 1481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415987257140