Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2227 132 9e-29 >seq2227 Length=13320 Score = 132 bits (146), Expect = 9e-29 Identities = 160/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| |||||||||| ||| | | |||||||||||||||| || |||| |||| Sbjct 214 ACACGGTGGATGCCCAGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGTAAAGCGA 155 Query 66 CGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG----C 120 ||| || ||| | | || | ||| ||| ||||||||||||||||||| | Sbjct 154 CGGTAAGGTGATATGAACCGCTAC-AGCCGTCGATGTCCGAATGGGGAAACCCGGTGCAC 96 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 || || |||||||| ||||||||||| ||||| |||||| || |||||||||| Sbjct 95 TCTGTGCATCATTGCAGCATGAATACATAGTGCTGCAAGGCGAACCGGGGGAACTGAAAC 36 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGA 215 ||||||||| | ||||||||||||||||||||| Sbjct 35 ATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918370960192