Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2727 145 2e-32 seq2343 80.6 6e-13 seq2311 75.2 2e-11 >seq2727 Length=321 Score = 145 bits (160), Expect = 2e-32 Identities = 136/172 (79%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 |||| | ||||||| ||| || ||||| || | ||||| | |||||| |||| || Sbjct 171 AAAGTACTTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTG 113 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 112 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 53 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTG 253 |||| ||||| | | |||||||||| | ||| ||||| | ||||||| Sbjct 52 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTG 1 >seq2343 Length=598 Score = 80.6 bits (88), Expect = 6e-13 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 196 CTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGG 255 |||||||||| ||||| | | |||||||||| | ||| ||||| | ||||||||| Sbjct 1 CTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGG 60 Query 256 CCGTTACCCCGCCTACTACCTAAT 279 || ||||||||||||||| ||||| Sbjct 61 CCATTACCCCGCCTACTAGCTAAT 84 >seq2311 Length=627 Score = 75.2 bits (82), Expect = 2e-11 Identities = 67/84 (80%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 196 CTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGG 255 |||||||||| ||||| | | |||||||||| | ||| ||||| | ||||||| | Sbjct 1 CTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAG 60 Query 256 CCGTTACCCCGCCTACTACCTAAT 279 |||||||||| ||||||| ||||| Sbjct 61 CCGTTACCCCACCTACTAGCTAAT 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068766204544