Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq47 201 2e-49 >seq47 Length=279382 Score = 201 bits (222), Expect = 2e-49 Identities = 250/334 (75%), Gaps = 9/334 (3%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA- 62 ||||| ||||| |||||| ||| |||||| || |||||||||| ||||||||| Sbjct 80756 CCCGACAAGGGGAGTGAAACAGATCCTGAAATCGGAAGCCTACAAGCAGTCGGAGCCACC 80815 Query 63 GTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGA 122 | | | ||||||||||| ||||||| |||||| | | ||| || | || | || | Sbjct 80816 GCGCGT-GGTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTCAT-GTGCCGTGCAA 80873 Query 123 GGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGA-GT 181 | ||||| || ||| ||| || || ||||||||| || || ||||||| | || Sbjct 80874 GCTTAAGCCGTT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAATAGGGCGAATAAGT 80929 Query 182 TGGTGGCGCTA-GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA 240 || || | ||| ||||||| |||||||| ||| ||||||||||||| ||||| Sbjct 80930 ACGTCGCATGACGACCCGAAACCAGGTGATCTATCCATGAGCAGGTTGAAGGTTGGGTAA 80989 Query 241 CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGG 300 | | ||||||||||||||||| || |||||||| || |||||||||| | || |||| Sbjct 80990 CACCAACTGGAGGACCGAACCGGTGAATGTTGAAAAATTCTCGGATGACTTGTGGATAGG 81049 Query 301 GGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||| ||| |||||| || Sbjct 81050 GGTGAAAGGCCAATCAAACCTGGACATAGCTGGT 81083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972781682176