Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq47 104 2e-20 seq427 77.0 3e-12 >seq47 Length=279382 Score = 104 bits (114), Expect = 2e-20 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| |||||||||| |||||| || || ||| |||||||||||| ||| Sbjct 81918 GCGACTGTTTATCAAAAACACAGGGCTCTGCGAAGCCGCAAGGCGACGTATAGGGTCTGA 81977 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||| ||||||||| Sbjct 81978 CGCCTGCCCGGTGCCTGAAGGTTAA 82002 >seq427 Length=39484 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 4922 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 4981 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTA 151 || |||||||||||| ||||| ||| Sbjct 4982 ACACCTGCCCGGTGCTGGAAGATTA 5006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476791302423