Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq47 122 6e-26 >seq47 Length=279382 Score = 122 bits (134), Expect = 6e-26 Identities = 112/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||| ||||||||||||||||||||| || |||||||||||||||| || Sbjct 82578 TACCTTTTATTCGTTGAGCGATGGCCCTTCCACGCAGGACCACCGGATCACTATGGCCGA 82519 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||||||| | |||| ||||||| ||| || ||| |||||||||||| Sbjct 82518 CTTTCGTCTCTGCTCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCG 82459 Query 121 CACTAC-GATTTCCGACCG 138 || || |||||||||||| Sbjct 82458 -ACGACCGATTTCCGACCG 82441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351993786100